PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_000764-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family WRKY
Protein Properties Length: 576aa    MW: 62358.8 Da    PI: 6.6013
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_000764-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.66.8e-30227286159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    ++Dg++WrKYGqK  +g+++pr+YYrCt a  Cpv+k+v+r+aed +++++tYeg+Hnh+
  NNU_000764-RA 227 MNDGCQWRKYGQKIARGNPCPRAYYRCTVApACPVRKQVQRCAEDMSILITTYEGTHNHP 286
                    58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.9E-31212288IPR003657WRKY domain
SuperFamilySSF1182909.81E-27220288IPR003657WRKY domain
PROSITE profilePS5081128.231222288IPR003657WRKY domain
SMARTSM007741.8E-35227287IPR003657WRKY domain
PfamPF031062.6E-26228286IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    Send to blast
MAHGSPAKLH EFSRWVTNSL SSETRIPTVR TEMSSMETIL RASSTIKKDQ EDPLESAKAE  60
MGEVREENER LKMILSRIVK DYQSLQMQFY GIVEQEEAKK SGDTAPVDQE IEEPELVSLS  120
LGRTASEPKK DEKNSNSSKS KEDDDQEGLS LGLDCKFEVS KPASTEKASN PSQENSFEEP  180
KEEDAGETWP PSKILKAMRS GDDEVSQQTH VKKARVSVRA RCDTPTMNDG CQWRKYGQKI  240
ARGNPCPRAY YRCTVAPACP VRKQVQRCAE DMSILITTYE GTHNHPLPVS ATAMASTTSA  300
AACMLMSGSS SSRSIPGSSA TNTTSADLHG LNFNLGDNTR ARPSFYLPNS SISSATSHPT  360
ITLDLTAPPS SSASSSSQNN RLSPNFPVQR YSSTSFNLSS TEPNNSQLTW GNGYLSYGAQ  420
PYTKNQQLGP LNLGRQPQPQ EHFYQSYMQK NNPAPSQQSL TETIAAATKA ITSDPSFRSA  480
LAAAITSIVG GGSTGAQGNQ GGCENFGQNL KWGENINTIT SYTSTPNGNG CASSYLNRSS  540
SSNTQQGSLM ILPPALPFST SKSASAFPAD TRDHIN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-20214288174WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010256554.10.0PREDICTED: probable WRKY transcription factor 72 isoform X1
TrEMBLD7SIE70.0D7SIE7_VITVI; Putative uncharacterized protein
STRINGVIT_17s0000g05810.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-79WRKY DNA-binding protein 72